SNP Profiles of IMC 103   View Data

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 Key

 1234567891011121314
_Input profile
TTCCCCTTCCGGACCCAGCTAAGGATCC
1._RUQ_862
__CC_____AG_AA___
2._RUQ_862
__CC_CCGGACGGAG__GGATCC
3._RUQ_862
AACCCCAAGGGGACGGAGAGAAGGATGG
 1516171819202122232425262728
_Input profile
AGACCCGTCGACCCCCTTGTGGTTCCCC
1._RUQ_862
_AC__GGACCC_TTGTGG_CCCC
2._RUQ_862
____CGACCC______GG
3._RUQ_862
_AC_ACCGACGGGG_ACGGAACCGG
 2930313233343536373839404142
_Input profile
CCCCAACCCCGGGGTTGTTTCCTTGGAG
1._RUQ_862
__AACC____GT___GG_
2._RUQ_862
GGCC__CC_GGTT__CC_CC_
3._RUQ_862
_GGAA_GGCCGG_AAAAGGAACCAG

Input profile: IMC_103 RUQ_862

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._IMC_103 RUQ_862

96.9 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._IMC_103 RUQ_862

80 %
20 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

3._IMC_103 RUQ_862

44.4 %
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484